Port recent Machine updates

[Enkidu93]

• Port un-ported updates since Machine df7d6e9c0bf1de8cba9462fba89208e6546db8fe
• Also, port yet un-ported pieces of Correctly parse and place verse text in verse 0 machine#344 and Fix crashes while reading USFM machine#333

Hopefully there aren't too many things we've missed along the way. There are fewer things that need to be ported to Machine from machine.py luckily although I was surprised to discover that #141 has never been ported 🤪.

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This change is 

[codecov-commenter]

Codecov Report

❌ Patch coverage is 96.90265% with 7 lines in your changes missing coverage. Please review.
✅ Project coverage is 90.75%. Comparing base (f1dc4f1) to head (7a284d9).

Files with missing lines	Patch %	Lines
...atext_project_versification_error_detector_base.py	42.85%	4 Missing ⚠️
.../corpora/scripture_ref_usfm_parser_handler_base.py	93.33%	2 Missing ⚠️
machine/corpora/paratext_project_settings.py	50.00%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #264      +/-   ##
==========================================
+ Coverage   90.68%   90.75%   +0.07%     
==========================================
  Files         355      355              
  Lines       22508    22675     +167     
==========================================
+ Hits        20411    20579     +168     
+ Misses       2097     2096       -1     

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