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Fix FPKM calcualtion#242

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JoshLoecker merged 33 commits intodevelopfrom
fix-fpkm-calculation
Feb 10, 2026
Merged

Fix FPKM calcualtion#242
JoshLoecker merged 33 commits intodevelopfrom
fix-fpkm-calculation

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This fixes FPKM calculations to use per-gene fragment lengths instead of per-sample averages

Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
…dataframe object

Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
…M scores

Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
…essing)

Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
…Counts information

Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
Signed-off-by: Josh Loecker <joshloecker@icloud.com>
@JoshLoecker JoshLoecker merged commit 500fc70 into develop Feb 10, 2026
3 checks passed
@JoshLoecker JoshLoecker deleted the fix-fpkm-calculation branch February 10, 2026 18:59
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