From 9d5e62ea80d9ee89eb28113c192ef8813695b779 Mon Sep 17 00:00:00 2001 From: Ziv Yaniv Date: Wed, 4 Feb 2026 15:08:13 -0500 Subject: [PATCH] Update the enviornment configuration files. --- .github/workflows/main.yml | 2 +- environment.yml | 4 ++-- environment_dev.yml | 4 ++-- tests/requirements_testing.txt | 12 ++++++------ 4 files changed, 11 insertions(+), 11 deletions(-) diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml index b7fe000..a20d8f3 100644 --- a/.github/workflows/main.yml +++ b/.github/workflows/main.yml @@ -76,7 +76,7 @@ jobs: run: | python -m pip install --upgrade pip python -m pip install -r tests/requirements_testing.txt - jupyter nbextension enable --py --sys-prefix widgetsnbextension + jupyter server extension enable --py widgetsnbextension - name: Download data if: steps.cache.outputs.cache-hit != 'true' run: python downloaddata.py data/ data/manifest.json diff --git a/environment.yml b/environment.yml index 7ca844f..03dd08c 100644 --- a/environment.yml +++ b/environment.yml @@ -4,10 +4,10 @@ channels: - conda-forge dependencies: + - python=3.13 - pip - pip: - - python=3.13 - - jupyter~=7.0 + - notebook~=7.0 - matplotlib - ipywidgets - numpy diff --git a/environment_dev.yml b/environment_dev.yml index 81bf26d..08d3749 100644 --- a/environment_dev.yml +++ b/environment_dev.yml @@ -4,10 +4,10 @@ channels: - conda-forge dependencies: + - python=3.13 - pip - pip: - - python=3.13 - - jupyter~=7.0 + - notebook~=7.0 - matplotlib - ipywidgets - numpy diff --git a/tests/requirements_testing.txt b/tests/requirements_testing.txt index 7ea0401..ea77224 100755 --- a/tests/requirements_testing.txt +++ b/tests/requirements_testing.txt @@ -1,13 +1,13 @@ -pytest -markdown -lxml -pyenchant -jupyter +notebook~=7.0 matplotlib ipywidgets -itkwidgets numpy scipy pandas multiprocess SimpleITK>=2.2.0 +ipympl +pytest +markdown +lxml +pyenchant